Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF144AP50876 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF144AP50876 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF144AP50876 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF144AP50876 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF144AP50876 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
RNF144AP50876 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF144AP50876 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF144AP50876 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF144AP50876 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF144AP50876 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF144AP50876 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF144AP50876 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF144AP50876 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF144AP50876 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF144AP50876 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF144AP50876 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF144AP50876 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF144AP50876 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF144AP50876 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF144AP50876 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF144AP50876 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF144AP50876 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF144AP50876 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF144AP50876 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF144AP50876 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF144AP50876 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF144AP50876 AC005229.4-201ENST00000610085 2198 ntBASIC19.65■□□□□ 0.74
RNF144AP50876 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF144AP50876 AC003102.1-202ENST00000563394 1796 ntBASIC19.65■□□□□ 0.74
RNF144AP50876 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF144AP50876 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.64■□□□□ 0.74
RNF144AP50876 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF144AP50876 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF144AP50876 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 MIR572-201ENST00000384983 95 ntBASIC19.64■□□□□ 0.73
RNF144AP50876 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF144AP50876 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF144AP50876 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
RNF144AP50876 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF144AP50876 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF144AP50876 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF144AP50876 AP006587.3-201ENST00000525742 1516 ntBASIC19.63■□□□□ 0.73
RNF144AP50876 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF144AP50876 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF144AP50876 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF144AP50876 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF144AP50876 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF144AP50876 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF144AP50876 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF144AP50876 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF144AP50876 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF144AP50876 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF144AP50876 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF144AP50876 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF144AP50876 Z98882.1-201ENST00000622160 2253 ntBASIC19.62■□□□□ 0.73
RNF144AP50876 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms