Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 AC010542.4-201ENST00000563151 1910 ntBASIC19.8■□□□□ 0.76
CLK1P49759 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK1P49759 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK1P49759 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLK1P49759 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CLK1P49759 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.79■□□□□ 0.76
CLK1P49759 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 AC096631.2-201ENST00000436136 790 ntBASIC19.79■□□□□ 0.76
CLK1P49759 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK1P49759 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK1P49759 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK1P49759 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLK1P49759 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLK1P49759 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 AC024257.2-201ENST00000549699 147 ntBASIC19.78■□□□□ 0.76
CLK1P49759 AC106739.1-201ENST00000617035 715 ntBASIC19.78■□□□□ 0.76
CLK1P49759 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
CLK1P49759 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK1P49759 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLK1P49759 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLK1P49759 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.77■□□□□ 0.76
CLK1P49759 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.77■□□□□ 0.76
CLK1P49759 AL031602.1-201ENST00000633169 911 ntBASIC19.77■□□□□ 0.76
CLK1P49759 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CLK1P49759 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLK1P49759 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK1P49759 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLK1P49759 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLK1P49759 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLK1P49759 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLK1P49759 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 LINC01960-201ENST00000563759 1884 ntBASIC19.76■□□□□ 0.75
CLK1P49759 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CLK1P49759 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK1P49759 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK1P49759 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CLK1P49759 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 PBX2P1-201ENST00000493219 1291 ntBASIC19.76■□□□□ 0.75
CLK1P49759 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 AC133561.4-201ENST00000566112 224 ntBASIC19.76■□□□□ 0.75
CLK1P49759 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.76■□□□□ 0.75
CLK1P49759 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK1P49759 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.75■□□□□ 0.75
CLK1P49759 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLK1P49759 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK1P49759 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.75■□□□□ 0.75
CLK1P49759 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK1P49759 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.75■□□□□ 0.75
CLK1P49759 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.75■□□□□ 0.75
CLK1P49759 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLK1P49759 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK1P49759 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK1P49759 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CLK1P49759 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK1P49759 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLK1P49759 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK1P49759 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLK1P49759 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK1P49759 EDA-201ENST00000338901 1233 ntBASIC19.74■□□□□ 0.75
CLK1P49759 BX842568.3-201ENST00000418104 571 ntBASIC19.74■□□□□ 0.75
CLK1P49759 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.74■□□□□ 0.75
CLK1P49759 AP005435.1-201ENST00000529293 1178 ntBASIC19.74■□□□□ 0.75
CLK1P49759 MIR4767-201ENST00000582827 78 ntBASIC19.74■□□□□ 0.75
CLK1P49759 AL139246.5-201ENST00000606645 996 ntBASIC19.74■□□□□ 0.75
CLK1P49759 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CLK1P49759 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms