Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP9P49458 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP9P49458 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.72■□□□□ 0.59
SRP9P49458 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.72■□□□□ 0.59
SRP9P49458 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP9P49458 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP9P49458 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SRP9P49458 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SRP9P49458 Z98882.1-201ENST00000622160 2253 ntBASIC18.71■□□□□ 0.59
SRP9P49458 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP9P49458 OR2I1P-207ENST00000453522 948 ntBASIC18.71■□□□□ 0.59
SRP9P49458 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.71■□□□□ 0.59
SRP9P49458 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP9P49458 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP9P49458 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SRP9P49458 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP9P49458 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SRP9P49458 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SRP9P49458 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
SRP9P49458 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.7■□□□□ 0.58
SRP9P49458 FEM1AP4-201ENST00000443167 1987 ntBASIC18.7■□□□□ 0.58
SRP9P49458 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SRP9P49458 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.7■□□□□ 0.58
SRP9P49458 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.7■□□□□ 0.58
SRP9P49458 AL391422.3-201ENST00000603791 2761 ntBASIC18.7■□□□□ 0.58
SRP9P49458 AL355001.2-201ENST00000620617 1191 ntBASIC18.7■□□□□ 0.58
SRP9P49458 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP9P49458 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.69■□□□□ 0.58
SRP9P49458 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SRP9P49458 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SRP9P49458 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SRP9P49458 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SRP9P49458 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.69■□□□□ 0.58
SRP9P49458 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SRP9P49458 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SRP9P49458 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP9P49458 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRP9P49458 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.68■□□□□ 0.58
SRP9P49458 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SRP9P49458 BX842568.3-201ENST00000418104 571 ntBASIC18.68■□□□□ 0.58
SRP9P49458 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRP9P49458 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.68■□□□□ 0.58
SRP9P49458 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
SRP9P49458 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SRP9P49458 LINC01006-201ENST00000333319 2292 ntBASIC18.68■□□□□ 0.58
SRP9P49458 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRP9P49458 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.68■□□□□ 0.58
SRP9P49458 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP9P49458 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP9P49458 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP9P49458 AC007952.6-201ENST00000573168 2673 ntBASIC18.67■□□□□ 0.58
SRP9P49458 AC003957.1-201ENST00000625108 2673 ntBASIC18.67■□□□□ 0.58
SRP9P49458 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP9P49458 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRP9P49458 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP9P49458 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP9P49458 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP9P49458 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP9P49458 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP9P49458 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP9P49458 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms