Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.38■□□□□ 0.69
RFC3P40938 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC3P40938 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RFC3P40938 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
RFC3P40938 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RFC3P40938 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RFC3P40938 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC3P40938 AC080038.3-201ENST00000623346 1952 ntBASIC19.37■□□□□ 0.69
RFC3P40938 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC3P40938 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC3P40938 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC3P40938 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC3P40938 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.37■□□□□ 0.69
RFC3P40938 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC3P40938 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RFC3P40938 MYCNOS-205ENST00000641950 531 ntBASIC19.37■□□□□ 0.69
RFC3P40938 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC3P40938 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC3P40938 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.36■□□□□ 0.69
RFC3P40938 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC3P40938 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC3P40938 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.36■□□□□ 0.69
RFC3P40938 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RFC3P40938 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
RFC3P40938 AC010141.2-201ENST00000452426 721 ntBASIC19.36■□□□□ 0.69
RFC3P40938 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.36■□□□□ 0.69
RFC3P40938 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.36■□□□□ 0.69
RFC3P40938 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.36■□□□□ 0.69
RFC3P40938 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC3P40938 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.35■□□□□ 0.69
RFC3P40938 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC3P40938 AC138907.5-202ENST00000569484 235 ntBASIC19.35■□□□□ 0.69
RFC3P40938 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.35■□□□□ 0.69
RFC3P40938 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC3P40938 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RFC3P40938 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC3P40938 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RFC3P40938 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC3P40938 DUX4L16-201ENST00000555130 1264 ntBASIC19.34■□□□□ 0.69
RFC3P40938 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.34■□□□□ 0.69
RFC3P40938 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.34■□□□□ 0.69
RFC3P40938 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RFC3P40938 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 AC104771.1-201ENST00000603335 964 ntBASIC19.34■□□□□ 0.69
RFC3P40938 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.34■□□□□ 0.69
RFC3P40938 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC3P40938 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC3P40938 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms