Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXA6P31267 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXA6P31267 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXA6P31267 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXA6P31267 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXA6P31267 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA6P31267 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA6P31267 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA6P31267 LSM12P1-201ENST00000411836 588 ntBASIC21.18■□□□□ 0.98
HOXA6P31267 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.18■□□□□ 0.98
HOXA6P31267 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.18■□□□□ 0.98
HOXA6P31267 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
HOXA6P31267 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXA6P31267 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXA6P31267 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXA6P31267 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
HOXA6P31267 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA6P31267 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HOXA6P31267 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXA6P31267 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXA6P31267 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.17■□□□□ 0.98
HOXA6P31267 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.17■□□□□ 0.98
HOXA6P31267 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA6P31267 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA6P31267 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA6P31267 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA6P31267 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA6P31267 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA6P31267 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HOXA6P31267 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXA6P31267 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.16■□□□□ 0.98
HOXA6P31267 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA6P31267 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXA6P31267 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXA6P31267 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXA6P31267 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA6P31267 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA6P31267 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA6P31267 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA6P31267 AC100791.3-201ENST00000617619 330 ntBASIC21.16■□□□□ 0.98
HOXA6P31267 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA6P31267 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HOXA6P31267 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA6P31267 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.15■□□□□ 0.98
HOXA6P31267 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
HOXA6P31267 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA6P31267 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 MIR718-201ENST00000390190 70 ntBASIC21.15■□□□□ 0.98
HOXA6P31267 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.15■□□□□ 0.98
HOXA6P31267 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA6P31267 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA6P31267 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.15■□□□□ 0.98
HOXA6P31267 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA6P31267 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.15■□□□□ 0.98
HOXA6P31267 AL359736.2-201ENST00000621992 437 ntBASIC21.15■□□□□ 0.98
HOXA6P31267 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA6P31267 HLA-B-256ENST00000639848 1089 ntBASIC21.15■□□□□ 0.98
HOXA6P31267 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HOXA6P31267 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA6P31267 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA6P31267 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA6P31267 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA6P31267 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HOXA6P31267 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA6P31267 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA6P31267 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA6P31267 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA6P31267 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HOXA6P31267 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.14■□□□□ 0.97
HOXA6P31267 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA6P31267 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA6P31267 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HOXA6P31267 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA6P31267 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA6P31267 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA6P31267 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA6P31267 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA6P31267 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA6P31267 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA6P31267 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXA6P31267 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA6P31267 AC060766.5-201ENST00000590539 871 ntBASIC21.13■□□□□ 0.97
HOXA6P31267 AC008403.3-201ENST00000598924 454 ntBASIC21.13■□□□□ 0.97
HOXA6P31267 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXA6P31267 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA6P31267 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms