Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.98■□□□□ 0.63
SDHAP31040 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.98■□□□□ 0.63
SDHAP31040 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.98■□□□□ 0.63
SDHAP31040 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SDHAP31040 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SDHAP31040 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SDHAP31040 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.97■□□□□ 0.63
SDHAP31040 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.97■□□□□ 0.63
SDHAP31040 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.97■□□□□ 0.63
SDHAP31040 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.97■□□□□ 0.63
SDHAP31040 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.97■□□□□ 0.63
SDHAP31040 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
SDHAP31040 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SDHAP31040 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SDHAP31040 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAP31040 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SDHAP31040 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SDHAP31040 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.96■□□□□ 0.63
SDHAP31040 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.96■□□□□ 0.63
SDHAP31040 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SDHAP31040 AC027682.1-201ENST00000562846 899 ntBASIC18.96■□□□□ 0.63
SDHAP31040 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.96■□□□□ 0.63
SDHAP31040 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.96■□□□□ 0.63
SDHAP31040 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.96■□□□□ 0.63
SDHAP31040 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAP31040 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAP31040 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAP31040 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.96■□□□□ 0.63
SDHAP31040 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.96■□□□□ 0.63
SDHAP31040 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SDHAP31040 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SDHAP31040 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.95■□□□□ 0.62
SDHAP31040 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.95■□□□□ 0.62
SDHAP31040 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.95■□□□□ 0.62
SDHAP31040 AC096631.2-201ENST00000436136 790 ntBASIC18.95■□□□□ 0.62
SDHAP31040 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.95■□□□□ 0.62
SDHAP31040 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.95■□□□□ 0.62
SDHAP31040 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.95■□□□□ 0.62
SDHAP31040 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 AC008764.7-201ENST00000593779 1081 ntBASIC18.95■□□□□ 0.62
SDHAP31040 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAP31040 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SDHAP31040 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.94■□□□□ 0.62
SDHAP31040 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SDHAP31040 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAP31040 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAP31040 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAP31040 AC099791.1-201ENST00000416440 715 ntBASIC18.94■□□□□ 0.62
SDHAP31040 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SDHAP31040 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.94■□□□□ 0.62
SDHAP31040 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SDHAP31040 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAP31040 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAP31040 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAP31040 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.93■□□□□ 0.62
SDHAP31040 AC009237.3-201ENST00000393279 1427 ntBASIC18.93■□□□□ 0.62
SDHAP31040 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.93■□□□□ 0.62
SDHAP31040 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SDHAP31040 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.93■□□□□ 0.62
SDHAP31040 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.93■□□□□ 0.62
SDHAP31040 PBX2P1-201ENST00000493219 1291 ntBASIC18.93■□□□□ 0.62
SDHAP31040 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.93■□□□□ 0.62
SDHAP31040 AC106739.1-201ENST00000617035 715 ntBASIC18.93■□□□□ 0.62
SDHAP31040 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SDHAP31040 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SDHAP31040 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.93■□□□□ 0.62
SDHAP31040 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAP31040 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms