Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.39■□□□□ 0.69
SHC1P29353 AC027612.3-201ENST00000413684 1047 ntBASIC19.39■□□□□ 0.69
SHC1P29353 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.39■□□□□ 0.69
SHC1P29353 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC1P29353 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.39■□□□□ 0.69
SHC1P29353 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHC1P29353 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SHC1P29353 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 BX005040.4-201ENST00000637145 1518 ntBASIC19.39■□□□□ 0.69
SHC1P29353 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 FAM99A-202ENST00000538190 1989 ntBASIC19.39■□□□□ 0.69
SHC1P29353 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC1P29353 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SHC1P29353 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHC1P29353 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC1P29353 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.38■□□□□ 0.69
SHC1P29353 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC1P29353 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC1P29353 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC1P29353 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC1P29353 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
SHC1P29353 MIR935-201ENST00000401179 91 ntBASIC19.37■□□□□ 0.69
SHC1P29353 TPRG1LP1-201ENST00000598702 760 ntBASIC19.37■□□□□ 0.69
SHC1P29353 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SHC1P29353 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC1P29353 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SHC1P29353 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC1P29353 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.36■□□□□ 0.69
SHC1P29353 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.36■□□□□ 0.69
SHC1P29353 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC1P29353 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 AC010542.4-201ENST00000563151 1910 ntBASIC19.36■□□□□ 0.69
SHC1P29353 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SHC1P29353 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHC1P29353 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC1P29353 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC1P29353 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHC1P29353 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC1P29353 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.35■□□□□ 0.69
SHC1P29353 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 AC026271.2-201ENST00000428091 497 ntBASIC19.35■□□□□ 0.69
SHC1P29353 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 YBX1P1-201ENST00000445822 960 ntBASIC19.35■□□□□ 0.69
SHC1P29353 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SHC1P29353 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 RARRES2P6-201ENST00000567333 442 ntBASIC19.35■□□□□ 0.69
SHC1P29353 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SHC1P29353 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SHC1P29353 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC1P29353 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SHC1P29353 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.34■□□□□ 0.69
SHC1P29353 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.34■□□□□ 0.69
SHC1P29353 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms