Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H1CP16403 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19■□□□□ 0.63
HIST1H1CP16403 BX842568.3-201ENST00000418104 571 ntBASIC19■□□□□ 0.63
HIST1H1CP16403 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19■□□□□ 0.63
HIST1H1CP16403 MIR4767-201ENST00000582827 78 ntBASIC19■□□□□ 0.63
HIST1H1CP16403 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H1CP16403 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19■□□□□ 0.63
HIST1H1CP16403 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H1CP16403 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H1CP16403 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HIST1H1CP16403 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HIST1H1CP16403 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.99■□□□□ 0.63
HIST1H1CP16403 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 UNC93B3-201ENST00000308076 687 ntBASIC18.99■□□□□ 0.63
HIST1H1CP16403 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.99■□□□□ 0.63
HIST1H1CP16403 SMUG1P1-201ENST00000590640 811 ntBASIC18.99■□□□□ 0.63
HIST1H1CP16403 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HIST1H1CP16403 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.99■□□□□ 0.63
HIST1H1CP16403 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.99■□□□□ 0.63
HIST1H1CP16403 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1CP16403 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HIST1H1CP16403 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.98■□□□□ 0.63
HIST1H1CP16403 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.98■□□□□ 0.63
HIST1H1CP16403 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HIST1H1CP16403 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 AL049796.1-201ENST00000565336 1766 ntBASIC18.98■□□□□ 0.63
HIST1H1CP16403 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HIST1H1CP16403 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1CP16403 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
HIST1H1CP16403 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 AC133561.4-201ENST00000566112 224 ntBASIC18.97■□□□□ 0.63
HIST1H1CP16403 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
HIST1H1CP16403 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1CP16403 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1CP16403 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H1CP16403 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms