Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
BCKDHAP12694 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.25■□□□□ 0.83
BCKDHAP12694 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.25■□□□□ 0.83
BCKDHAP12694 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.25■□□□□ 0.83
BCKDHAP12694 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.25■□□□□ 0.83
BCKDHAP12694 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.25■□□□□ 0.83
BCKDHAP12694 AL136162.1-201ENST00000607711 1078 ntBASIC20.25■□□□□ 0.83
BCKDHAP12694 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BCKDHAP12694 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.25■□□□□ 0.83
BCKDHAP12694 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
BCKDHAP12694 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.24■□□□□ 0.83
BCKDHAP12694 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHAP12694 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.23■□□□□ 0.83
BCKDHAP12694 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
BCKDHAP12694 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
BCKDHAP12694 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.23■□□□□ 0.83
BCKDHAP12694 AC131212.1-201ENST00000613771 668 ntBASIC20.23■□□□□ 0.83
BCKDHAP12694 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
BCKDHAP12694 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.23■□□□□ 0.83
BCKDHAP12694 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHAP12694 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHAP12694 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHAP12694 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.22■□□□□ 0.83
BCKDHAP12694 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.22■□□□□ 0.83
BCKDHAP12694 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHAP12694 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.22■□□□□ 0.83
BCKDHAP12694 AC126544.1-201ENST00000580842 1059 ntBASIC20.22■□□□□ 0.83
BCKDHAP12694 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 AC135279.3-201ENST00000610945 1311 ntBASIC20.22■□□□□ 0.83
BCKDHAP12694 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHAP12694 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.21■□□□□ 0.83
BCKDHAP12694 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BCKDHAP12694 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 AL049796.1-201ENST00000565336 1766 ntBASIC20.21■□□□□ 0.83
BCKDHAP12694 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
BCKDHAP12694 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.21■□□□□ 0.83
BCKDHAP12694 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
BCKDHAP12694 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.21■□□□□ 0.83
BCKDHAP12694 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.21■□□□□ 0.83
BCKDHAP12694 IGHV3-19-201ENST00000521488 291 ntBASIC20.21■□□□□ 0.83
BCKDHAP12694 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
BCKDHAP12694 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.21■□□□□ 0.83
BCKDHAP12694 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
BCKDHAP12694 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHAP12694 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
BCKDHAP12694 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
BCKDHAP12694 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCKDHAP12694 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BCKDHAP12694 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
BCKDHAP12694 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCKDHAP12694 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.2■□□□□ 0.82
BCKDHAP12694 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCKDHAP12694 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCKDHAP12694 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BCKDHAP12694 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.2■□□□□ 0.82
BCKDHAP12694 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCKDHAP12694 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms