Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPRP12270 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.1■□□□□ 0.81
TPRP12270 POM121L13P-201ENST00000422362 380 ntBASIC20.1■□□□□ 0.81
TPRP12270 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.1■□□□□ 0.81
TPRP12270 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.1■□□□□ 0.81
TPRP12270 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.1■□□□□ 0.81
TPRP12270 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.1■□□□□ 0.81
TPRP12270 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.1■□□□□ 0.81
TPRP12270 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.1■□□□□ 0.81
TPRP12270 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 EEF1DP3-203ENST00000566025 782 ntBASIC20.09■□□□□ 0.81
TPRP12270 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.09■□□□□ 0.81
TPRP12270 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TPRP12270 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.09■□□□□ 0.81
TPRP12270 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
TPRP12270 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPRP12270 AC133681.1-201ENST00000465482 601 ntBASIC20.09■□□□□ 0.81
TPRP12270 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.09■□□□□ 0.81
TPRP12270 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TPRP12270 AP003071.4-201ENST00000562276 1284 ntBASIC20.09■□□□□ 0.81
TPRP12270 MIR6089-201ENST00000616698 64 ntBASIC20.09■□□□□ 0.81
TPRP12270 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TPRP12270 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.09■□□□□ 0.81
TPRP12270 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.08■□□□□ 0.81
TPRP12270 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPRP12270 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPRP12270 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPRP12270 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.08■□□□□ 0.81
TPRP12270 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TPRP12270 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
TPRP12270 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.08■□□□□ 0.8
TPRP12270 AC010141.3-201ENST00000456659 717 ntBASIC20.08■□□□□ 0.8
TPRP12270 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.08■□□□□ 0.8
TPRP12270 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPRP12270 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TPRP12270 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPRP12270 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPRP12270 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TPRP12270 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPRP12270 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.07■□□□□ 0.8
TPRP12270 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.07■□□□□ 0.8
TPRP12270 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.07■□□□□ 0.8
TPRP12270 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPRP12270 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TPRP12270 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPRP12270 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.07■□□□□ 0.8
TPRP12270 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.07■□□□□ 0.8
TPRP12270 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TPRP12270 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.06■□□□□ 0.8
TPRP12270 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 SOX15-203ENST00000570788 1093 ntBASIC20.06■□□□□ 0.8
TPRP12270 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TPRP12270 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 MIR6786-201ENST00000616843 113 ntBASIC20.06■□□□□ 0.8
TPRP12270 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
TPRP12270 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPRP12270 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TPRP12270 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TPRP12270 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TPRP12270 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TPRP12270 AC142086.6-201ENST00000621154 1765 ntBASIC20.05■□□□□ 0.8
TPRP12270 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.05■□□□□ 0.8
TPRP12270 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
TPRP12270 HLA-B-256ENST00000639848 1089 ntBASIC20.05■□□□□ 0.8
TPRP12270 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.05■□□□□ 0.8
TPRP12270 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TPRP12270 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 AC005521.1-201ENST00000393351 872 ntBASIC20.05■□□□□ 0.8
TPRP12270 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TPRP12270 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.05■□□□□ 0.8
TPRP12270 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 AC092803.2-201ENST00000564287 1899 ntBASIC20.05■□□□□ 0.8
TPRP12270 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPRP12270 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.04■□□□□ 0.8
TPRP12270 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPRP12270 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.04■□□□□ 0.8
TPRP12270 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
TPRP12270 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.04■□□□□ 0.8
TPRP12270 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms