Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 KRT87P-202ENST00000534226 1464 ntBASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 AC006970.2-201ENST00000450065 779 ntBASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 AC127496.7-201ENST00000625110 1798 ntBASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCNYL3P0C7X3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCNYL3P0C7X3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CCNYL3P0C7X3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
CCNYL3P0C7X3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CCNYL3P0C7X3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 RAP2CP1-201ENST00000605103 478 ntBASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNYL3P0C7X3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 LINC00565-201ENST00000562710 2331 ntBASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 AC079089.2-201ENST00000531211 1277 ntBASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 AC104187.1-201ENST00000607510 612 ntBASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL3P0C7X3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 LINC01960-201ENST00000563759 1884 ntBASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL3P0C7X3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL3P0C7X3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms