Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.76■■□□□ 1.71
COL1A1P02452 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A1P02452 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A1P02452 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.76■■□□□ 1.71
COL1A1P02452 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.75■■□□□ 1.71
COL1A1P02452 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 CYP2T1P-201ENST00000432607 1285 ntBASIC25.75■■□□□ 1.71
COL1A1P02452 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.75■■□□□ 1.71
COL1A1P02452 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
COL1A1P02452 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
COL1A1P02452 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
COL1A1P02452 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
COL1A1P02452 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A1P02452 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.74■■□□□ 1.71
COL1A1P02452 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.74■■□□□ 1.71
COL1A1P02452 AC098934.4-201ENST00000564127 592 ntBASIC25.74■■□□□ 1.71
COL1A1P02452 AC133552.2-202ENST00000575694 574 ntBASIC25.74■■□□□ 1.71
COL1A1P02452 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A1P02452 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A1P02452 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A1P02452 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A1P02452 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.74■■□□□ 1.71
COL1A1P02452 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.74■■□□□ 1.71
COL1A1P02452 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A1P02452 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A1P02452 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.74■■□□□ 1.71
COL1A1P02452 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A1P02452 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A1P02452 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.73■■□□□ 1.71
COL1A1P02452 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A1P02452 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A1P02452 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A1P02452 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.73■■□□□ 1.71
COL1A1P02452 AF201337.1-201ENST00000520239 748 ntBASIC25.72■■□□□ 1.71
COL1A1P02452 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.72■■□□□ 1.71
COL1A1P02452 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.72■■□□□ 1.71
COL1A1P02452 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.72■■□□□ 1.71
COL1A1P02452 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.72■■□□□ 1.71
COL1A1P02452 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL1A1P02452 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.72■■□□□ 1.71
COL1A1P02452 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL1A1P02452 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL1A1P02452 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL1A1P02452 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.72■■□□□ 1.71
COL1A1P02452 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.72■■□□□ 1.71
COL1A1P02452 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.72■■□□□ 1.71
COL1A1P02452 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.72■■□□□ 1.71
COL1A1P02452 SLC7A5P1-201ENST00000568957 537 ntBASIC25.72■■□□□ 1.71
COL1A1P02452 AC133041.1-202ENST00000642053 222 ntBASIC25.72■■□□□ 1.71
COL1A1P02452 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.71■■□□□ 1.71
COL1A1P02452 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.71■■□□□ 1.71
COL1A1P02452 AC092053.2-201ENST00000640557 1818 ntBASIC25.71■■□□□ 1.71
COL1A1P02452 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.71■■□□□ 1.71
COL1A1P02452 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL1A1P02452 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL1A1P02452 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL1A1P02452 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL1A1P02452 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.71■■□□□ 1.71
COL1A1P02452 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.71■■□□□ 1.71
COL1A1P02452 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.7■■□□□ 1.71
COL1A1P02452 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL1A1P02452 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL1A1P02452 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL1A1P02452 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
COL1A1P02452 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.7■■□□□ 1.71
COL1A1P02452 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.7■■□□□ 1.71
COL1A1P02452 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL1A1P02452 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.7■■□□□ 1.7
COL1A1P02452 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL1A1P02452 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL1A1P02452 AC013268.1-206ENST00000638368 961 ntBASIC25.7■■□□□ 1.7
COL1A1P02452 AC112229.1-201ENST00000639295 961 ntBASIC25.7■■□□□ 1.7
COL1A1P02452 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
COL1A1P02452 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL1A1P02452 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL1A1P02452 AC061975.6-201ENST00000579045 1553 ntBASIC25.7■■□□□ 1.7
COL1A1P02452 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
COL1A1P02452 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.69■■□□□ 1.7
COL1A1P02452 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
COL1A1P02452 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A1P02452 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.69■■□□□ 1.7
COL1A1P02452 FAM99A-202ENST00000538190 1989 ntBASIC25.69■■□□□ 1.7
COL1A1P02452 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.69■■□□□ 1.7
COL1A1P02452 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A1P02452 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL1A1P02452 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
COL1A1P02452 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.68■■□□□ 1.7
COL1A1P02452 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.68■■□□□ 1.7
COL1A1P02452 AC007322.4-201ENST00000509611 723 ntBASIC25.68■■□□□ 1.7
COL1A1P02452 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL1A1P02452 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
COL1A1P02452 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL1A1P02452 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms