Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT4O95628 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.8■□□□□ 0.6
CNOT4O95628 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.8■□□□□ 0.6
CNOT4O95628 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CNOT4O95628 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.8■□□□□ 0.6
CNOT4O95628 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CNOT4O95628 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT4O95628 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNOT4O95628 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT4O95628 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT4O95628 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CNOT4O95628 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT4O95628 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.79■□□□□ 0.6
CNOT4O95628 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT4O95628 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.79■□□□□ 0.6
CNOT4O95628 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.79■□□□□ 0.6
CNOT4O95628 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.79■□□□□ 0.6
CNOT4O95628 AC242852.2-201ENST00000615738 1807 ntBASIC18.79■□□□□ 0.6
CNOT4O95628 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNOT4O95628 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 KRT18P11-201ENST00000435214 1283 ntBASIC18.78■□□□□ 0.6
CNOT4O95628 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.78■□□□□ 0.6
CNOT4O95628 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CNOT4O95628 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNOT4O95628 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT4O95628 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CNOT4O95628 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CNOT4O95628 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT4O95628 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT4O95628 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT4O95628 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT4O95628 AC080038.3-201ENST00000623346 1952 ntBASIC18.77■□□□□ 0.6
CNOT4O95628 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CNOT4O95628 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNOT4O95628 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT4O95628 HLA-L-209ENST00000420110 1011 ntBASIC18.77■□□□□ 0.6
CNOT4O95628 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT4O95628 AC053503.5-201ENST00000601508 636 ntBASIC18.77■□□□□ 0.6
CNOT4O95628 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT4O95628 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT4O95628 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT4O95628 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CNOT4O95628 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT4O95628 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT4O95628 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNOT4O95628 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT4O95628 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNOT4O95628 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT4O95628 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT4O95628 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNOT4O95628 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT4O95628 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT4O95628 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT4O95628 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT4O95628 AL117328.2-201ENST00000624617 1940 ntBASIC18.76■□□□□ 0.59
CNOT4O95628 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
CNOT4O95628 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT4O95628 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CNOT4O95628 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CNOT4O95628 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT4O95628 EEF1DP3-203ENST00000566025 782 ntBASIC18.75■□□□□ 0.59
CNOT4O95628 AC138907.5-202ENST00000569484 235 ntBASIC18.75■□□□□ 0.59
CNOT4O95628 KRT18P61-201ENST00000585825 1298 ntBASIC18.75■□□□□ 0.59
CNOT4O95628 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.75■□□□□ 0.59
CNOT4O95628 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNOT4O95628 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.75■□□□□ 0.59
CNOT4O95628 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT4O95628 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT4O95628 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT4O95628 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNOT4O95628 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms