Protein–RNA interactions for Protein: O75865

TRAPPC6A, Trafficking protein particle complex subunit 6A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6AO75865 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 KRT18P11-201ENST00000435214 1283 ntBASIC19.29■□□□□ 0.68
TRAPPC6AO75865 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 AC090192.1-201ENST00000517740 490 ntBASIC19.29■□□□□ 0.68
TRAPPC6AO75865 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 BID-214ENST00000617586 542 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAPPC6AO75865 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAPPC6AO75865 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 AC080038.1-201ENST00000611274 1154 ntBASIC19.27■□□□□ 0.68
TRAPPC6AO75865 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAPPC6AO75865 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAPPC6AO75865 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TRAPPC6AO75865 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAPPC6AO75865 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.27■□□□□ 0.67
TRAPPC6AO75865 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAPPC6AO75865 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAPPC6AO75865 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 GUSBP5-202ENST00000510805 1989 ntBASIC19.25■□□□□ 0.67
TRAPPC6AO75865 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.25■□□□□ 0.67
TRAPPC6AO75865 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAPPC6AO75865 AC242852.2-201ENST00000615738 1807 ntBASIC19.24■□□□□ 0.67
TRAPPC6AO75865 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 AC053503.5-201ENST00000601508 636 ntBASIC19.24■□□□□ 0.67
TRAPPC6AO75865 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAPPC6AO75865 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
TRAPPC6AO75865 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
TRAPPC6AO75865 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms