Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.39■□□□□ 0.85
SNRNP200O75643 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNRNP200O75643 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNRNP200O75643 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNRNP200O75643 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.39■□□□□ 0.85
SNRNP200O75643 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNRNP200O75643 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 AC010141.2-201ENST00000452426 721 ntBASIC20.38■□□□□ 0.85
SNRNP200O75643 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SNRNP200O75643 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
SNRNP200O75643 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.38■□□□□ 0.85
SNRNP200O75643 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.38■□□□□ 0.85
SNRNP200O75643 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.38■□□□□ 0.85
SNRNP200O75643 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.38■□□□□ 0.85
SNRNP200O75643 AC092666.2-201ENST00000613287 246 ntBASIC20.38■□□□□ 0.85
SNRNP200O75643 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRNP200O75643 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.37■□□□□ 0.85
SNRNP200O75643 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 LINC00565-201ENST00000562710 2331 ntBASIC20.37■□□□□ 0.85
SNRNP200O75643 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
SNRNP200O75643 MYCNOS-205ENST00000641950 531 ntBASIC20.37■□□□□ 0.85
SNRNP200O75643 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SNRNP200O75643 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRNP200O75643 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.36■□□□□ 0.85
SNRNP200O75643 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.36■□□□□ 0.85
SNRNP200O75643 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 LINC02228-203ENST00000641970 1355 ntBASIC20.36■□□□□ 0.85
SNRNP200O75643 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.36■□□□□ 0.85
SNRNP200O75643 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.36■□□□□ 0.85
SNRNP200O75643 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.36■□□□□ 0.85
SNRNP200O75643 AC004911.1-201ENST00000416316 871 ntBASIC20.36■□□□□ 0.85
SNRNP200O75643 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRNP200O75643 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SNRNP200O75643 DUX4L16-201ENST00000555130 1264 ntBASIC20.35■□□□□ 0.85
SNRNP200O75643 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.35■□□□□ 0.85
SNRNP200O75643 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.35■□□□□ 0.85
SNRNP200O75643 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.35■□□□□ 0.85
SNRNP200O75643 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRNP200O75643 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.35■□□□□ 0.85
SNRNP200O75643 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.35■□□□□ 0.85
SNRNP200O75643 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.35■□□□□ 0.85
SNRNP200O75643 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNRNP200O75643 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SNRNP200O75643 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRNP200O75643 AC006015.1-201ENST00000429970 570 ntBASIC20.34■□□□□ 0.85
SNRNP200O75643 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRNP200O75643 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.34■□□□□ 0.85
SNRNP200O75643 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.34■□□□□ 0.85
SNRNP200O75643 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SNRNP200O75643 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRNP200O75643 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNRNP200O75643 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRNP200O75643 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRNP200O75643 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SNRNP200O75643 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRNP200O75643 RAP2CP1-201ENST00000605103 478 ntBASIC20.33■□□□□ 0.85
SNRNP200O75643 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.33■□□□□ 0.85
SNRNP200O75643 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.33■□□□□ 0.85
SNRNP200O75643 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRNP200O75643 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.33■□□□□ 0.84
SNRNP200O75643 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.33■□□□□ 0.84
SNRNP200O75643 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.33■□□□□ 0.84
SNRNP200O75643 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms