Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.03■□□□□ 0.64
PFDN1O60925 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.03■□□□□ 0.64
PFDN1O60925 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.03■□□□□ 0.64
PFDN1O60925 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.03■□□□□ 0.64
PFDN1O60925 GABARAPL3-202ENST00000624044 1851 ntBASIC19.03■□□□□ 0.64
PFDN1O60925 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.03■□□□□ 0.64
PFDN1O60925 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PFDN1O60925 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PFDN1O60925 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PFDN1O60925 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PFDN1O60925 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PFDN1O60925 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PFDN1O60925 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PFDN1O60925 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PFDN1O60925 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.01■□□□□ 0.63
PFDN1O60925 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.01■□□□□ 0.63
PFDN1O60925 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN1O60925 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19■□□□□ 0.63
PFDN1O60925 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PFDN1O60925 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19■□□□□ 0.63
PFDN1O60925 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19■□□□□ 0.63
PFDN1O60925 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 AC020916.1-201ENST00000587762 1774 ntBASIC19■□□□□ 0.63
PFDN1O60925 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19■□□□□ 0.63
PFDN1O60925 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19■□□□□ 0.63
PFDN1O60925 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 AC106820.2-201ENST00000563775 3264 ntBASIC19■□□□□ 0.63
PFDN1O60925 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
PFDN1O60925 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN1O60925 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PFDN1O60925 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PFDN1O60925 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
PFDN1O60925 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.99■□□□□ 0.63
PFDN1O60925 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.99■□□□□ 0.63
PFDN1O60925 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PFDN1O60925 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PFDN1O60925 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN1O60925 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.98■□□□□ 0.63
PFDN1O60925 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PFDN1O60925 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PFDN1O60925 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PFDN1O60925 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PFDN1O60925 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN1O60925 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms