Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PRAMEF11O60813 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF11O60813 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.59■■□□□ 1.05
PRAMEF11O60813 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.59■■□□□ 1.05
PRAMEF11O60813 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.59■■□□□ 1.05
PRAMEF11O60813 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 AC104187.1-201ENST00000607510 612 ntBASIC21.59■■□□□ 1.05
PRAMEF11O60813 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.59■■□□□ 1.05
PRAMEF11O60813 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF11O60813 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF11O60813 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF11O60813 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PRAMEF11O60813 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF11O60813 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF11O60813 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PRAMEF11O60813 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF11O60813 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
PRAMEF11O60813 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.58■■□□□ 1.05
PRAMEF11O60813 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PRAMEF11O60813 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRAMEF11O60813 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRAMEF11O60813 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PRAMEF11O60813 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.58■■□□□ 1.04
PRAMEF11O60813 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 AC138907.5-202ENST00000569484 235 ntBASIC21.57■■□□□ 1.04
PRAMEF11O60813 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.57■■□□□ 1.04
PRAMEF11O60813 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF11O60813 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 AC244015.2-201ENST00000616358 1861 ntBASIC21.56■■□□□ 1.04
PRAMEF11O60813 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF11O60813 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF11O60813 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.56■■□□□ 1.04
PRAMEF11O60813 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF11O60813 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF11O60813 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF11O60813 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.55■■□□□ 1.04
PRAMEF11O60813 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PRAMEF11O60813 KRT19P1-201ENST00000405746 1186 ntBASIC21.55■■□□□ 1.04
PRAMEF11O60813 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.55■■□□□ 1.04
PRAMEF11O60813 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.55■■□□□ 1.04
PRAMEF11O60813 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.55■■□□□ 1.04
PRAMEF11O60813 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.55■■□□□ 1.04
PRAMEF11O60813 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms