Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.67■□□□□ 0.9
NPHS1O60500 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.67■□□□□ 0.9
NPHS1O60500 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.67■□□□□ 0.9
NPHS1O60500 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPHS1O60500 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPHS1O60500 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
NPHS1O60500 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPHS1O60500 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.67■□□□□ 0.9
NPHS1O60500 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NPHS1O60500 SLC47A1P1-202ENST00000449666 945 ntBASIC20.66■□□□□ 0.9
NPHS1O60500 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NPHS1O60500 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.66■□□□□ 0.9
NPHS1O60500 AC011298.3-201ENST00000615796 283 ntBASIC20.66■□□□□ 0.9
NPHS1O60500 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.66■□□□□ 0.9
NPHS1O60500 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NPHS1O60500 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPHS1O60500 FEM1AP1-201ENST00000431297 1995 ntBASIC20.66■□□□□ 0.9
NPHS1O60500 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.66■□□□□ 0.9
NPHS1O60500 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.66■□□□□ 0.9
NPHS1O60500 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.65■□□□□ 0.9
NPHS1O60500 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.65■□□□□ 0.9
NPHS1O60500 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPHS1O60500 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.65■□□□□ 0.9
NPHS1O60500 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPHS1O60500 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NPHS1O60500 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPHS1O60500 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.64■□□□□ 0.9
NPHS1O60500 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPHS1O60500 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NPHS1O60500 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPHS1O60500 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPHS1O60500 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.64■□□□□ 0.89
NPHS1O60500 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.64■□□□□ 0.89
NPHS1O60500 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NPHS1O60500 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.64■□□□□ 0.89
NPHS1O60500 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPHS1O60500 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NPHS1O60500 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NPHS1O60500 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.63■□□□□ 0.89
NPHS1O60500 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.63■□□□□ 0.89
NPHS1O60500 LINC01006-201ENST00000333319 2292 ntBASIC20.63■□□□□ 0.89
NPHS1O60500 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NPHS1O60500 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPHS1O60500 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
NPHS1O60500 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
NPHS1O60500 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPHS1O60500 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPHS1O60500 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPHS1O60500 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPHS1O60500 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NPHS1O60500 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
NPHS1O60500 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.62■□□□□ 0.89
NPHS1O60500 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.62■□□□□ 0.89
NPHS1O60500 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPHS1O60500 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPHS1O60500 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.61■□□□□ 0.89
NPHS1O60500 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPHS1O60500 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPHS1O60500 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.61■□□□□ 0.89
NPHS1O60500 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.61■□□□□ 0.89
NPHS1O60500 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
NPHS1O60500 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.61■□□□□ 0.89
NPHS1O60500 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms