Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
XRCC2O43543 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.41■□□□□ 0.54
XRCC2O43543 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC2O43543 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC2O43543 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC2O43543 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
XRCC2O43543 SUDS3P1-201ENST00000505831 966 ntBASIC18.4■□□□□ 0.54
XRCC2O43543 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.4■□□□□ 0.54
XRCC2O43543 Z98882.1-201ENST00000622160 2253 ntBASIC18.4■□□□□ 0.54
XRCC2O43543 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.4■□□□□ 0.54
XRCC2O43543 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
XRCC2O43543 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.4■□□□□ 0.54
XRCC2O43543 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 AC003102.1-202ENST00000563394 1796 ntBASIC18.4■□□□□ 0.54
XRCC2O43543 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC2O43543 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
XRCC2O43543 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.39■□□□□ 0.54
XRCC2O43543 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.39■□□□□ 0.54
XRCC2O43543 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.39■□□□□ 0.53
XRCC2O43543 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC2O43543 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.39■□□□□ 0.53
XRCC2O43543 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
XRCC2O43543 AC142381.2-201ENST00000566120 298 ntBASIC18.39■□□□□ 0.53
XRCC2O43543 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC2O43543 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
XRCC2O43543 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC2O43543 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
XRCC2O43543 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC2O43543 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.39■□□□□ 0.53
XRCC2O43543 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.39■□□□□ 0.53
XRCC2O43543 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC2O43543 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC2O43543 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
XRCC2O43543 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
XRCC2O43543 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.38■□□□□ 0.53
XRCC2O43543 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.38■□□□□ 0.53
XRCC2O43543 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
XRCC2O43543 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.38■□□□□ 0.53
XRCC2O43543 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
XRCC2O43543 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC2O43543 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.38■□□□□ 0.53
XRCC2O43543 BX005040.4-201ENST00000637145 1518 ntBASIC18.38■□□□□ 0.53
XRCC2O43543 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
XRCC2O43543 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
XRCC2O43543 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.37■□□□□ 0.53
XRCC2O43543 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.37■□□□□ 0.53
XRCC2O43543 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
XRCC2O43543 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
XRCC2O43543 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.37■□□□□ 0.53
XRCC2O43543 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.37■□□□□ 0.53
XRCC2O43543 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
XRCC2O43543 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
XRCC2O43543 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XRCC2O43543 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
XRCC2O43543 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.37■□□□□ 0.53
XRCC2O43543 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XRCC2O43543 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XRCC2O43543 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XRCC2O43543 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
XRCC2O43543 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
XRCC2O43543 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.36■□□□□ 0.53
XRCC2O43543 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
XRCC2O43543 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.36■□□□□ 0.53
XRCC2O43543 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms