Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.07■□□□□ 0.64
TNFSF11O14788 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
TNFSF11O14788 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TNFSF11O14788 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFSF11O14788 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFSF11O14788 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFSF11O14788 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFSF11O14788 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF11O14788 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF11O14788 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFSF11O14788 KRT19P1-201ENST00000405746 1186 ntBASIC19.06■□□□□ 0.64
TNFSF11O14788 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF11O14788 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF11O14788 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF11O14788 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.06■□□□□ 0.64
TNFSF11O14788 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF11O14788 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFSF11O14788 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF11O14788 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFSF11O14788 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF11O14788 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF11O14788 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF11O14788 AC092666.2-201ENST00000613287 246 ntBASIC19.05■□□□□ 0.64
TNFSF11O14788 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TNFSF11O14788 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF11O14788 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFSF11O14788 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF11O14788 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFSF11O14788 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF11O14788 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF11O14788 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNFSF11O14788 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF11O14788 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.04■□□□□ 0.64
TNFSF11O14788 AC022517.1-201ENST00000592429 346 ntBASIC19.04■□□□□ 0.64
TNFSF11O14788 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF11O14788 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF11O14788 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TNFSF11O14788 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFSF11O14788 EEF1DP3-203ENST00000566025 782 ntBASIC19.03■□□□□ 0.64
TNFSF11O14788 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF11O14788 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFSF11O14788 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.02■□□□□ 0.64
TNFSF11O14788 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.02■□□□□ 0.64
TNFSF11O14788 AC137761.2-201ENST00000561729 223 ntBASIC19.02■□□□□ 0.64
TNFSF11O14788 AC145350.3-201ENST00000569033 163 ntBASIC19.02■□□□□ 0.64
TNFSF11O14788 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.02■□□□□ 0.64
TNFSF11O14788 AC053503.5-201ENST00000601508 636 ntBASIC19.02■□□□□ 0.64
TNFSF11O14788 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF11O14788 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF11O14788 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNFSF11O14788 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFSF11O14788 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFSF11O14788 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
TNFSF11O14788 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFSF11O14788 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
TNFSF11O14788 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TNFSF11O14788 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms