Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3FO00303 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3FO00303 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.77■□□□□ 0.92
EIF3FO00303 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.77■□□□□ 0.92
EIF3FO00303 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.77■□□□□ 0.92
EIF3FO00303 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3FO00303 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EIF3FO00303 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.77■□□□□ 0.92
EIF3FO00303 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.77■□□□□ 0.91
EIF3FO00303 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EIF3FO00303 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
EIF3FO00303 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.76■□□□□ 0.91
EIF3FO00303 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EIF3FO00303 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EIF3FO00303 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
EIF3FO00303 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
EIF3FO00303 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
EIF3FO00303 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
EIF3FO00303 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.76■□□□□ 0.91
EIF3FO00303 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3FO00303 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.76■□□□□ 0.91
EIF3FO00303 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.75■□□□□ 0.91
EIF3FO00303 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
EIF3FO00303 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.75■□□□□ 0.91
EIF3FO00303 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.75■□□□□ 0.91
EIF3FO00303 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.75■□□□□ 0.91
EIF3FO00303 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.75■□□□□ 0.91
EIF3FO00303 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
EIF3FO00303 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3FO00303 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.74■□□□□ 0.91
EIF3FO00303 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.74■□□□□ 0.91
EIF3FO00303 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 MIR6084-201ENST00000622012 110 ntBASIC20.74■□□□□ 0.91
EIF3FO00303 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3FO00303 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 AC026310.3-201ENST00000625186 2373 ntBASIC20.73■□□□□ 0.91
EIF3FO00303 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.73■□□□□ 0.91
EIF3FO00303 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.73■□□□□ 0.91
EIF3FO00303 AC123595.1-201ENST00000440769 1046 ntBASIC20.73■□□□□ 0.91
EIF3FO00303 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.73■□□□□ 0.91
EIF3FO00303 EEF1DP3-203ENST00000566025 782 ntBASIC20.73■□□□□ 0.91
EIF3FO00303 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
EIF3FO00303 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.73■□□□□ 0.91
EIF3FO00303 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.73■□□□□ 0.91
EIF3FO00303 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
EIF3FO00303 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3FO00303 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
EIF3FO00303 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms