Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 AL356441.2-201ENST00000443009 864 ntBASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 AP006587.3-201ENST00000525742 1516 ntBASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV9S1A1TA0A576 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV9S1A1TA0A576 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV9S1A1TA0A576 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.33■■□□□ 1
TCRBV9S1A1TA0A576 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV9S1A1TA0A576 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
TCRBV9S1A1TA0A576 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV9S1A1TA0A576 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 LINC01006-201ENST00000333319 2292 ntBASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCRBV9S1A1TA0A576 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV9S1A1TA0A576 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 AC131281.2-201ENST00000520478 145 ntBASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms