Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRBV5-5A0A0J9YX44 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 KRT16P3-201ENST00000439127 1283 ntBASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-5A0A0J9YX44 AC092667.1-201ENST00000434301 2586 ntBASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 GABARAPL3-202ENST00000624044 1851 ntBASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 AL356740.2-201ENST00000601559 647 ntBASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 AC092171.4-201ENST00000609130 632 ntBASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 AL121603.2-201ENST00000557373 2117 ntBASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-5A0A0J9YX44 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.39■□□□□ 0.54
TRBV5-5A0A0J9YX44 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
TRBV5-5A0A0J9YX44 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRBV5-5A0A0J9YX44 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-5A0A0J9YX44 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 AC006128.1-201ENST00000624704 1661 ntBASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-5A0A0J9YX44 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 MIR3621-201ENST00000580529 85 ntBASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 AP005212.1-201ENST00000581547 1997 ntBASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 AP006587.3-201ENST00000525742 1516 ntBASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-5A0A0J9YX44 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms