Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 LINC01006-201ENST00000333319 2292 ntBASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SERBP1P1-201ENST00000396021 1160 ntBASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.43■□□□□ 0.7
TRBV4-1A0A0J9YWV2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV4-1A0A0J9YWV2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV4-1A0A0J9YWV2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SYT6-210ENST00000641643 1587 ntBASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TRBV4-1A0A0J9YWV2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AP005435.1-201ENST00000529293 1178 ntBASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AL138724.1-201ENST00000606771 1088 ntBASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AC136469.2-201ENST00000623944 1028 ntBASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV4-1A0A0J9YWV2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms