Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 STK32C-205ENST00000456004 607 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 BOD1-206ENST00000480951 814 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 AC025884.2-201ENST00000553429 711 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L13-201ENST00000554103 1267 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L15-201ENST00000611059 1267 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L23-201ENST00000615195 1269 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L24-201ENST00000617576 1269 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L22-201ENST00000618238 1269 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L20-201ENST00000619712 1269 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L21-201ENST00000622058 1269 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L10-201ENST00000622460 1267 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L25-201ENST00000624915 1269 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 AFG3L1P-217ENST00000557444 2447 ntBASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV22A0A0B4J277 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRAV22A0A0B4J277 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 LTB4R2-202ENST00000528054 3092 ntBASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV22A0A0B4J277 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 AC144652.1-201ENST00000609974 1624 ntBASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 LINC01971-201ENST00000617888 1048 ntBASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms