Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 AL034346.1-201ENST00000568244 1277 ntBASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 AL136162.1-201ENST00000607711 1078 ntBASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 AC005229.4-201ENST00000610085 2198 ntBASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 AC008406.3-201ENST00000620001 1374 ntBASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-3A0A0B4J271 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-3A0A0B4J271 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 AC024257.2-201ENST00000549699 147 ntBASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV12-3A0A0B4J271 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-3A0A0B4J271 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-3A0A0B4J271 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-3A0A0B4J271 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV12-3A0A0B4J271 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 BX842568.3-201ENST00000418104 571 ntBASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 AC126544.1-201ENST00000580842 1059 ntBASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms