Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 AL451085.2-201ENST00000605085 799 ntBASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 KRT8P33-201ENST00000508125 1423 ntBASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 AL034346.1-201ENST00000568244 1277 ntBASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 AC241377.3-202ENST00000626088 1088 ntBASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 AC241585.3-202ENST00000628937 1088 ntBASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 AC245100.8-202ENST00000629247 1058 ntBASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV1-2A0A0B4J238 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 AC073314.1-201ENST00000568729 2216 ntBASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 Z92544.1-202ENST00000571933 1220 ntBASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV1-2A0A0B4J238 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 AC003102.1-202ENST00000563394 1796 ntBASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV1-2A0A0B4J238 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 MTDHP2-201ENST00000601468 714 ntBASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 AC087239.1-201ENST00000622671 572 ntBASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms