Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.77■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.77■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 TPRG1LP1-201ENST00000598702 760 ntBASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 IRS3P-201ENST00000223076 1006 ntBASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AL354811.1-201ENST00000610286 706 ntBASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms