Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 FBXW4P1-201ENST00000426721 2239 ntBASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NTF6G-201ENST00000591094 616 ntBASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 IKBKGP1-201ENST00000612193 1073 ntBASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.27■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.27■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms