Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-2A0A087WT02 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-2A0A087WT02 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-2A0A087WT02 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV9-2A0A087WT02 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV9-2A0A087WT02 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV9-2A0A087WT02 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV9-2A0A087WT02 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 AC026471.1-201ENST00000564629 3026 ntBASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 AF131216.4-201ENST00000638924 1588 ntBASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-2A0A087WT02 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 AC131212.1-201ENST00000613771 668 ntBASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 FEM1AP1-201ENST00000431297 1995 ntBASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV9-2A0A087WT02 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 AL022069.1-201ENST00000568025 1636 ntBASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-2A0A087WT02 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 FEM1AP4-201ENST00000443167 1987 ntBASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-2A0A087WT02 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-2A0A087WT02 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-2A0A087WT02 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-2A0A087WT02 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-2A0A087WT02 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-2A0A087WT02 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms