Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGKV2-28A0A075B6P5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.98□□□□□ -0.17
IGKV2-28A0A075B6P5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 AC026471.6-201ENST00000622954 1905 ntBASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IGKV2-28A0A075B6P5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 AC004687.1-201ENST00000579003 1625 ntBASIC13.96□□□□□ -0.17
IGKV2-28A0A075B6P5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGKV2-28A0A075B6P5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.96□□□□□ -0.18
IGKV2-28A0A075B6P5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGKV2-28A0A075B6P5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.96□□□□□ -0.18
IGKV2-28A0A075B6P5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
IGKV2-28A0A075B6P5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.96□□□□□ -0.18
IGKV2-28A0A075B6P5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 OXCT2P1-201ENST00000447263 1535 ntBASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
IGKV2-28A0A075B6P5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms