Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC007731.1-201ENST00000617303 578 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 Vax2os1_3.1-201ENST00000622578 197 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AL669831.6-201ENST00000635557 837 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 RPL15-204ENST00000413699 2053 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 NDUFB4P11-202ENST00000600530 2079 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 BEST1-201ENST00000378043 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 PDXDC1-216ENST00000569715 3775 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AL031663.3-201ENST00000617473 1794 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 CDCA7-204ENST00000410101 1369 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 CACNB4-220ENST00000636129 2283 ntTSL 5 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 RRM2-212ENST00000615152 3434 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 LINC01562-201ENST00000366181 2366 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 PCNX2-213ENST00000488780 1465 ntTSL 5 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AL160286.1-201ENST00000427215 2471 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 MPO-201ENST00000225275 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 STRADA-247ENST00000640679 1816 ntTSL 5 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 MIR3142HG-201ENST00000517927 2301 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 GDNF-201ENST00000326524 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 ESM1-202ENST00000381405 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 IFIT5-201ENST00000371795 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC135048.4-201ENST00000624286 3641 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 SIRPB2-201ENST00000359801 2642 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 ZNF493-204ENST00000594390 1536 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 GEMIN2-201ENST00000250379 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 THYN1-201ENST00000341541 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 THYN1-204ENST00000392595 893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 GEMIN2-203ENST00000396249 801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 MGAT3-AS1-201ENST00000432239 498 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 OR7E38P-201ENST00000442908 985 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 USF1P1-201ENST00000451645 526 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 SCARNA20-201ENST00000516768 131 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC040970.1-201ENST00000520885 483 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 C12orf73-206ENST00000547975 1243 ntTSL 3 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 LINC00592-201ENST00000549830 1044 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 IGHV1OR15-2-201ENST00000558824 353 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC051619.1-201ENST00000560007 616 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC008870.3-201ENST00000566143 641 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 MIR4721-201ENST00000577590 89 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC068491.3-201ENST00000603052 606 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC007787.2-201ENST00000625100 599 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC012183.1-201ENST00000625197 499 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC007493.1-201ENST00000637635 683 ntTSL 5 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 EFCAB6-201ENST00000262726 4869 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 FAM90A8P-201ENST00000528334 1395 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 TBX15-202ENST00000369429 3504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 YAF2-219ENST00000555248 5095 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 HERC2P9-206ENST00000529624 5187 ntBASIC11.88□□□□□ -0.51
LMO3Q8TAP4 CU633980.1-201ENST00000613894 1708 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 C1orf64-201ENST00000329454 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 SLC7A7-202ENST00000397528 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 SLC7A7-203ENST00000397529 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 PCYOX1L-207ENST00000514349 2793 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AOX2P-201ENST00000467645 1473 ntTSL 5 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 C8B-205ENST00000535057 2289 ntTSL 2 BASIC11.88□□□□□ -0.51
LMO3Q8TAP4 AC138207.4-201ENST00000580979 1661 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 TUBBP1-201ENST00000248151 1335 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 KIR2DP1-201ENST00000415311 1331 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 CDHR4-202ENST00000412678 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 CASP7-211ENST00000621345 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 MAP6-204ENST00000526740 1755 ntTSL 5 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 ACSL6-204ENST00000379244 2658 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AP004247.2-201ENST00000526131 1890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 CFAP45-202ENST00000426543 1976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 HPCAL4-203ENST00000617690 4758 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 PARD3B-203ENST00000358768 3432 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms