Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 AC018445.3-201ENST00000624177 1945 ntBASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 BX323043.1-201ENST00000641006 1765 ntBASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COMMD3-BMI1R4GMX3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3-BMI1R4GMX3 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 AC137630.3-201ENST00000607245 391 ntBASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 AL031848.2-201ENST00000607670 837 ntBASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.86■□□□□ 0.77
COMMD3-BMI1R4GMX3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3-BMI1R4GMX3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms