Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC4Q9Y5F7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 AL162430.1-201ENST00000480705 870 ntBASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGC4Q9Y5F7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 AC079834.2-201ENST00000609776 1949 ntBASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 NTF6G-201ENST00000591094 616 ntBASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC4Q9Y5F7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 AC004854.2-201ENST00000608450 1441 ntBASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 AP004607.4-201ENST00000530158 1459 ntBASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 KRT18P5-201ENST00000436075 1291 ntBASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 KRT18P61-201ENST00000585825 1298 ntBASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC4Q9Y5F7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.47■■□□□ 1.03
PCDHGC4Q9Y5F7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 LINC00565-201ENST00000562710 2331 ntBASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 KRT87P-202ENST00000534226 1464 ntBASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGC4Q9Y5F7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms