Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 EP400NL-214ENST00000641289 2402 ntBASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB9Q9Y5E1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB9Q9Y5E1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB9Q9Y5E1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB9Q9Y5E1 AP006587.3-201ENST00000525742 1516 ntBASIC21.58■■□□□ 1.04
PCDHB9Q9Y5E1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHB9Q9Y5E1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB9Q9Y5E1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PCDHB9Q9Y5E1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PCDHB9Q9Y5E1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB9Q9Y5E1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 KRT19P1-201ENST00000405746 1186 ntBASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 FAM99A-202ENST00000538190 1989 ntBASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 AC055733.4-201ENST00000638462 1354 ntBASIC21.57■■□□□ 1.04
PCDHB9Q9Y5E1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms