Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 POU5F1P4-201ENST00000413175 1085 ntBASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 RPS2P4-201ENST00000476944 856 ntBASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 AL591742.1-201ENST00000604433 565 ntBASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTCBQ9Y3I0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RTCBQ9Y3I0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.09■■□□□ 1.93
RTCBQ9Y3I0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.09■■□□□ 1.93
RTCBQ9Y3I0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.09■■□□□ 1.93
RTCBQ9Y3I0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.09■■□□□ 1.93
RTCBQ9Y3I0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTCBQ9Y3I0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
RTCBQ9Y3I0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
RTCBQ9Y3I0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 RBM17P2-201ENST00000616397 1405 ntBASIC27.07■■□□□ 1.92
RTCBQ9Y3I0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
RTCBQ9Y3I0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 AC026366.1-201ENST00000488803 879 ntBASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
RTCBQ9Y3I0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 UNC93B5-201ENST00000530315 699 ntBASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 KRT16P2-201ENST00000414673 1423 ntBASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTCBQ9Y3I0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 UNC93B4-201ENST00000505679 747 ntBASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTCBQ9Y3I0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms