Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2D4Q9Y2X8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2D4Q9Y2X8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 pRNA.6-201ENST00000610482 90 ntBASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 pRNA.5-201ENST00000612139 90 ntBASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 pRNA.11-201ENST00000618423 90 ntBASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 pRNA.13-201ENST00000619112 90 ntBASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 AC087239.1-201ENST00000622671 572 ntBASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 AL121603.2-201ENST00000557373 2117 ntBASIC14.77□□□□□ -0.05
UBE2D4Q9Y2X8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 FEM1AP1-201ENST00000431297 1995 ntBASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 TSPY9P-201ENST00000440215 945 ntBASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 TSPY11P-201ENST00000442607 1045 ntBASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.76□□□□□ -0.05
UBE2D4Q9Y2X8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
UBE2D4Q9Y2X8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 AC006455.2-201ENST00000429931 906 ntBASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2D4Q9Y2X8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms