Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 MIR939-201ENST00000401314 82 ntBASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 AL136967.2-201ENST00000623968 743 ntBASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 AC007952.6-201ENST00000573168 2673 ntBASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 AC003957.1-201ENST00000625108 2673 ntBASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT11Q9UKZ1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT11Q9UKZ1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT11Q9UKZ1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 AF106564.1-201ENST00000607058 2553 ntBASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT11Q9UKZ1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 BX842568.3-201ENST00000418104 571 ntBASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.33■□□□□ 0.85
CNOT11Q9UKZ1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CNOT11Q9UKZ1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 AC091305.1-201ENST00000479476 895 ntBASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 AC027682.1-201ENST00000562846 899 ntBASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 LINC01006-201ENST00000333319 2292 ntBASIC20.32■□□□□ 0.84
CNOT11Q9UKZ1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT11Q9UKZ1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms