Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 CROCCP5-201ENST00000436658 830 ntBASIC19.52■□□□□ 0.72
LRFN1Q9P244 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.52■□□□□ 0.71
LRFN1Q9P244 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRFN1Q9P244 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.52■□□□□ 0.71
LRFN1Q9P244 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRFN1Q9P244 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.52■□□□□ 0.71
LRFN1Q9P244 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.52■□□□□ 0.71
LRFN1Q9P244 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 AC231657.2-201ENST00000624556 255 ntBASIC19.51■□□□□ 0.71
LRFN1Q9P244 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.51■□□□□ 0.71
LRFN1Q9P244 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN1Q9P244 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
LRFN1Q9P244 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN1Q9P244 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN1Q9P244 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.49■□□□□ 0.71
LRFN1Q9P244 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN1Q9P244 MIR663A-201ENST00000385250 93 ntBASIC19.49■□□□□ 0.71
LRFN1Q9P244 DUX4L16-201ENST00000555130 1264 ntBASIC19.49■□□□□ 0.71
LRFN1Q9P244 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.49■□□□□ 0.71
LRFN1Q9P244 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
LRFN1Q9P244 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.49■□□□□ 0.71
LRFN1Q9P244 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN1Q9P244 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRFN1Q9P244 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN1Q9P244 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN1Q9P244 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.49■□□□□ 0.71
LRFN1Q9P244 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN1Q9P244 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN1Q9P244 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 AC007322.1-201ENST00000426983 750 ntBASIC19.47■□□□□ 0.71
LRFN1Q9P244 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.47■□□□□ 0.71
LRFN1Q9P244 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms