Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 MIR4497-201ENST00000583208 89 ntBASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 AC120498.10-201ENST00000621827 505 ntBASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.25■■□□□ 1.95
TFCP2L1Q9NZI6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 AL591742.1-201ENST00000604433 565 ntBASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TFCP2L1Q9NZI6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 AC211429.1-201ENST00000415277 523 ntBASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 AC010331.1-201ENST00000611423 582 ntBASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 AC004812.2-201ENST00000611079 2094 ntBASIC27.23■■□□□ 1.95
TFCP2L1Q9NZI6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 AL162412.1-201ENST00000567129 965 ntBASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.22■■□□□ 1.95
TFCP2L1Q9NZI6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 FAM197Y4-202ENST00000622692 608 ntBASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
TFCP2L1Q9NZI6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.2■■□□□ 1.95
TFCP2L1Q9NZI6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TFCP2L1Q9NZI6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 REXO1L12P-201ENST00000622156 912 ntBASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TFCP2L1Q9NZI6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 LSM12P1-201ENST00000411836 588 ntBASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 AL139125.2-201ENST00000623134 1869 ntBASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
TFCP2L1Q9NZI6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 AC008403.3-201ENST00000598924 454 ntBASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 AC008175.2-201ENST00000612840 297 ntBASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TFCP2L1Q9NZI6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 RPPH1-201ENST00000516869 333 ntBASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TFCP2L1Q9NZI6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms