Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.07■□□□□ 0
MRPL35Q9NZE8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.07■□□□□ 0
MRPL35Q9NZE8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MRPL35Q9NZE8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MRPL35Q9NZE8 AL020996.1-203ENST00000536896 2307 ntBASIC15.06■□□□□ 0
MRPL35Q9NZE8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MRPL35Q9NZE8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL35Q9NZE8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
MRPL35Q9NZE8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MRPL35Q9NZE8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
MRPL35Q9NZE8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
MRPL35Q9NZE8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MRPL35Q9NZE8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.05■□□□□ -0
MRPL35Q9NZE8 AC139795.1-202ENST00000500444 432 ntBASIC15.05■□□□□ -0
MRPL35Q9NZE8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.05■□□□□ -0
MRPL35Q9NZE8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.05■□□□□ -0
MRPL35Q9NZE8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.05■□□□□ -0
MRPL35Q9NZE8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.05■□□□□ -0
MRPL35Q9NZE8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL35Q9NZE8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
MRPL35Q9NZE8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 GABARAPL3-202ENST00000624044 1851 ntBASIC15.03■□□□□ -0
MRPL35Q9NZE8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 NTF6A-201ENST00000591175 560 ntBASIC15.03■□□□□ -0
MRPL35Q9NZE8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.03■□□□□ -0
MRPL35Q9NZE8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL35Q9NZE8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL35Q9NZE8 OXCT2P1-201ENST00000447263 1535 ntBASIC15.02■□□□□ -0
MRPL35Q9NZE8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL35Q9NZE8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms