Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
THUMPD1Q9NXG2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
THUMPD1Q9NXG2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
THUMPD1Q9NXG2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 AC131281.2-201ENST00000520478 145 ntBASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
THUMPD1Q9NXG2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 AP004607.7-201ENST00000527152 1677 ntBASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THUMPD1Q9NXG2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 AC026471.6-201ENST00000622954 1905 ntBASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THUMPD1Q9NXG2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.91■□□□□ 0.78
THUMPD1Q9NXG2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms