Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 SNORA78-201ENST00000459373 127 ntBASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 Z99916.2-201ENST00000604037 246 ntBASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 AP004607.7-201ENST00000527152 1677 ntBASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 AC004812.2-201ENST00000611079 2094 ntBASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BRWD1Q9NSI6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 AL445228.2-201ENST00000605589 952 ntBASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 RBM17P2-201ENST00000616397 1405 ntBASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 ABCB10P4-201ENST00000566803 2184 ntBASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
BRWD1Q9NSI6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRWD1Q9NSI6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 RPPH1-201ENST00000516869 333 ntBASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 BX088651.1-201ENST00000540551 451 ntBASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
BRWD1Q9NSI6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.34■■□□□ 1.17
BRWD1Q9NSI6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.33■■□□□ 1.17
BRWD1Q9NSI6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
BRWD1Q9NSI6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
BRWD1Q9NSI6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.16
BRWD1Q9NSI6 KRT16P2-201ENST00000414673 1423 ntBASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms