Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 AL133373.2-201ENST00000623187 2828 ntBASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC11.02□□□□□ -0.64
CDC42SE1Q9NRR8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE1Q9NRR8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 AP000997.3-201ENST00000623333 2250 ntBASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms