Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AIRN-201ENST00000601203 4374 ntBASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 AC090340.1-201ENST00000620778 4980 ntBASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMCO4Q9NRQ5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 AC005082.1-201ENST00000413042 2259 ntBASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 AC004408.2-201ENST00000623613 2777 ntBASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMCO4Q9NRQ5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.72■□□□□ 0.27
SMCO4Q9NRQ5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.71■□□□□ 0.27
SMCO4Q9NRQ5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.71■□□□□ 0.26
SMCO4Q9NRQ5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMCO4Q9NRQ5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms