Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.772e-6■■■■□ 24.6
EXOSC5Q9NQT4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.83e-6■■■■□ 24.6
EXOSC5Q9NQT4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.61□□□□□ -1.832e-6■■■■□ 24.6
EXOSC5Q9NQT4 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 43.34□□□□□ -1.873e-6■■■■□ 24.6
EXOSC5Q9NQT4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.942e-6■■■■□ 24.6
EXOSC5Q9NQT4 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.932e-6■■■■□ 24.6
EXOSC5Q9NQT4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.931e-6■■■■□ 24.6
EXOSC5Q9NQT4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.681e-6■■■■□ 24.6
EXOSC5Q9NQT4 SPG7-217ENST00000568151 544 ntTSL 417.91■□□□□ 0.461e-6■■■■□ 24.6
EXOSC5Q9NQT4 CARMIL2-204ENST00000602368 953 ntTSL 517.43■□□□□ 0.381e-6■■■■□ 24.6
EXOSC5Q9NQT4 SPG7-214ENST00000566371 581 ntTSL 317.06■□□□□ 0.321e-6■■■■□ 24.6
EXOSC5Q9NQT4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.01■□□□□ 0.311e-6■■■■□ 24.6
EXOSC5Q9NQT4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.96■□□□□ 0.311e-6■■■■□ 24.6
EXOSC5Q9NQT4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.88■□□□□ 0.291e-6■■■■□ 24.6
EXOSC5Q9NQT4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.83■□□□□ 0.291e-6■■■■□ 24.6
EXOSC5Q9NQT4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.281e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-205ENST00000417413 1613 ntTSL 1 (best)16.58■□□□□ 0.241e-6■■■■□ 24.6
EXOSC5Q9NQT4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.11e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.39□□□□□ -0.111e-6■■■■□ 24.6
EXOSC5Q9NQT4 CAPZB-207ENST00000459967 579 ntTSL 313.68□□□□□ -0.221e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.231e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.23□□□□□ -0.291e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.17□□□□□ -0.31e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.331e-6■■■■□ 24.6
EXOSC5Q9NQT4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.93□□□□□ -0.341e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-203ENST00000378809 2008 ntTSL 512.74□□□□□ -0.371e-6■■■■□ 24.6
EXOSC5Q9NQT4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.381e-6■■■■□ 24.6
EXOSC5Q9NQT4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.5□□□□□ -0.411e-6■■■■□ 24.6
EXOSC5Q9NQT4 CAPZB-208ENST00000482808 660 ntTSL 212.5□□□□□ -0.411e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-216ENST00000552199 1905 ntTSL 1 (best)12.2□□□□□ -0.461e-6■■■■□ 24.6
EXOSC5Q9NQT4 RNF123-210ENST00000487805 5882 ntTSL 212.16□□□□□ -0.461e-6■■■■□ 24.6
EXOSC5Q9NQT4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.05□□□□□ -0.481e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.69□□□□□ -0.541e-6■■■■□ 24.6
EXOSC5Q9NQT4 C3orf33-203ENST00000482061 1926 ntTSL 211.69□□□□□ -0.541e-6■■■■□ 24.6
EXOSC5Q9NQT4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.541e-6■■■■□ 24.6
EXOSC5Q9NQT4 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.541e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.56□□□□□ -0.561e-6■■■■□ 24.6
EXOSC5Q9NQT4 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.47□□□□□ -0.571e-6■■■■□ 24.6
EXOSC5Q9NQT4 AC092123.2-201ENST00000611189 5421 ntBASIC11.38□□□□□ -0.591e-6■■■■□ 24.6
EXOSC5Q9NQT4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.621e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.641e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC11.06□□□□□ -0.641e-6■■■■□ 24.6
EXOSC5Q9NQT4 RNF123-209ENST00000486102 4564 ntTSL 1 (best)10.7□□□□□ -0.71e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.711e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-208ENST00000520356 4273 ntTSL 1 (best) BASIC10.47□□□□□ -0.731e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-207ENST00000520214 4294 ntTSL 1 (best) BASIC10.29□□□□□ -0.761e-6■■■■□ 24.6
EXOSC5Q9NQT4 CARMIL2-209ENST00000602705 638 ntTSL 210.08□□□□□ -0.81e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-217ENST00000523924 4756 ntTSL 29.97□□□□□ -0.811e-6■■■■□ 24.6
EXOSC5Q9NQT4 C3orf33-202ENST00000465810 733 ntTSL 59.94□□□□□ -0.821e-6■■■■□ 24.6
EXOSC5Q9NQT4 C3orf33-204ENST00000486435 864 ntTSL 59.9□□□□□ -0.821e-6■■■■□ 24.6
EXOSC5Q9NQT4 RNF123-207ENST00000457726 4506 ntTSL 1 (best)9.88□□□□□ -0.831e-6■■■■□ 24.6
EXOSC5Q9NQT4 NCAPG2-210ENST00000491792 581 ntTSL 39.75□□□□□ -0.851e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-215ENST00000523243 4774 ntTSL 1 (best)9.73□□□□□ -0.851e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-216ENST00000523399 3734 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-6■■■■□ 24.6
EXOSC5Q9NQT4 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.911e-6■■■■□ 24.6
EXOSC5Q9NQT4 NCAPG2-207ENST00000472591 554 ntTSL 48.88□□□□□ -0.991e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -11e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZNF91-212ENST00000599743 662 ntTSL 3 BASIC8.6□□□□□ -1.031e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-208ENST00000578961 687 ntTSL 3 BASIC8.57□□□□□ -1.041e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZNF91-209ENST00000596989 565 ntTSL 38.44□□□□□ -1.061e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZNF91-204ENST00000593341 730 ntTSL 1 (best)8.41□□□□□ -1.061e-6■■■■□ 24.6
EXOSC5Q9NQT4 MAP2-206ENST00000445941 2019 ntTSL 58.39□□□□□ -1.071e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC8.35□□□□□ -1.071e-6■■■■□ 24.6
EXOSC5Q9NQT4 GRB2-210ENST00000582582 584 ntTSL 48.34□□□□□ -1.071e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC7.82□□□□□ -1.161e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZNF91-208ENST00000596528 2405 ntTSL 27.38□□□□□ -1.231e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.12□□□□□ -1.271e-6■■■■□ 24.6
EXOSC5Q9NQT4 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.86□□□□□ -1.311e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZNF91-211ENST00000599281 747 ntTSL 36.81□□□□□ -1.321e-6■■■■□ 24.6
EXOSC5Q9NQT4 DLG1-214ENST00000447466 858 ntTSL 1 (best)6.69□□□□□ -1.341e-6■■■■□ 24.6
EXOSC5Q9NQT4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.58□□□□□ -1.361e-6■■■■□ 24.6
EXOSC5Q9NQT4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.56□□□□□ -1.361e-6■■■■□ 24.6
EXOSC5Q9NQT4 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC6.48□□□□□ -1.371e-6■■■■□ 24.6
EXOSC5Q9NQT4 MRPS6-203ENST00000482679 1956 ntTSL 25.68□□□□□ -1.51e-6■■■■□ 24.6
EXOSC5Q9NQT4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.541e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-213ENST00000550647 742 ntTSL 35.37□□□□□ -1.551e-6■■■■□ 24.6
EXOSC5Q9NQT4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.25□□□□□ -1.571e-6■■■■□ 24.6
EXOSC5Q9NQT4 MAP2-204ENST00000392193 614 ntTSL 35.13□□□□□ -1.591e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-206ENST00000519827 659 ntTSL 35.11□□□□□ -1.591e-6■■■■□ 24.6
EXOSC5Q9NQT4 AC011933.2-201ENST00000578539 2790 ntBASIC4.91□□□□□ -1.621e-6■■■■□ 24.6
EXOSC5Q9NQT4 ZFAT-203ENST00000517307 866 ntTSL 54.87□□□□□ -1.631e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.83□□□□□ -1.641e-6■■■■□ 24.6
EXOSC5Q9NQT4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.65□□□□□ -1.671e-6■■■■□ 24.6
EXOSC5Q9NQT4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.671e-6■■■■□ 24.6
EXOSC5Q9NQT4 RAB3IP-208ENST00000526994 943 ntTSL 34.51□□□□□ -1.691e-6■■■■□ 24.6
EXOSC5Q9NQT4 DLG1-218ENST00000453607 539 ntTSL 44.17□□□□□ -1.741e-6■■■■□ 24.6
EXOSC5Q9NQT4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.771e-6■■■■□ 24.6
EXOSC5Q9NQT4 ARHGAP21-219ENST00000636842 551 ntTSL 53.83□□□□□ -1.81e-6■■■■□ 24.6
EXOSC5Q9NQT4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.57□□□□□ -1.841e-6■■■■□ 24.6
EXOSC5Q9NQT4 MRPS6-204ENST00000483977 3934 ntTSL 1 (best)3.25□□□□□ -1.891e-6■■■■□ 24.6
EXOSC5Q9NQT4 ATL2-213ENST00000474535 597 ntTSL 32.96□□□□□ -1.941e-6■■■■□ 24.6
EXOSC5Q9NQT4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2□□□□□ -2.091e-6■■■■□ 24.6
EXOSC5Q9NQT4 SMYD3-208ENST00000464398 540 ntTSL 36.7□□□□□ -1.341e-6■■■■□ 24.6
EXOSC5Q9NQT4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.015e-7■■■■□ 24.6
EXOSC5Q9NQT4 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.195e-7■■■■□ 24.6
EXOSC5Q9NQT4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.352e-7■■■■□ 24.6
EXOSC5Q9NQT4 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.82e-7■■■■□ 24.6
EXOSC5Q9NQT4 ARID1A-216ENST00000637465 699 ntTSL 53.85□□□□□ -1.792e-7■■■■□ 24.6
EXOSC5Q9NQT4 TFPI-207ENST00000421427 804 ntTSL 37.88□□□□□ -1.152e-7■■■■□ 24.6
EXOSC5Q9NQT4 TFPI-206ENST00000420747 685 ntTSL 37.61□□□□□ -1.192e-7■■■■□ 24.6
Retrieved 100 of 8,799 protein–RNA pairs in 327.3 ms