RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
RAB3IP-213ENST00000550647 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
RAB3IP-213ENST00000550647 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
RAB3IP-213ENST00000550647 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
RAB3IP-213ENST00000550647 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
RAB3IP-213ENST00000550647 FOXD1Q16676 465 aa16.36■□□□□ 0.21
RAB3IP-213ENST00000550647 ADRA2BP18089 450 aa15.61■□□□□ 0.09
RAB3IP-213ENST00000550647 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
RAB3IP-213ENST00000550647 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-213ENST00000550647 MSH5O43196 834 aa15.32■□□□□ 0.04
RAB3IP-213ENST00000550647 KCNA4P22459 653 aa15.24■□□□□ 0.03
RAB3IP-213ENST00000550647 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
RAB3IP-213ENST00000550647 PPP4R3CPQ6ZMV5 832 aa14.84□□□□□ -0.03
RAB3IP-213ENST00000550647 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-213ENST00000550647 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
RAB3IP-213ENST00000550647 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
RAB3IP-213ENST00000550647 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-213ENST00000550647 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-213ENST00000550647 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
RAB3IP-213ENST00000550647 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
RAB3IP-213ENST00000550647 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
RAB3IP-213ENST00000550647 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-213ENST00000550647 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
RAB3IP-213ENST00000550647 ZBTB22O15209 634 aa14.05□□□□□ -0.16
RAB3IP-213ENST00000550647 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-213ENST00000550647 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
RAB3IP-213ENST00000550647 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
RAB3IP-213ENST00000550647 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
RAB3IP-213ENST00000550647 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
RAB3IP-213ENST00000550647 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
RAB3IP-213ENST00000550647 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-213ENST00000550647 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
RAB3IP-213ENST00000550647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.325e-6■■■■□ 19.5
RAB3IP-213ENST00000550647 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-213ENST00000550647 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
RAB3IP-213ENST00000550647 FKBP8Q14318 412 aa13.02□□□□□ -0.33
RAB3IP-213ENST00000550647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-213ENST00000550647 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
RAB3IP-213ENST00000550647 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
RAB3IP-213ENST00000550647 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-213ENST00000550647 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
RAB3IP-213ENST00000550647 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-213ENST00000550647 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-213ENST00000550647 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-213ENST00000550647 APLP2Q06481 763 aa12.65□□□□□ -0.38
RAB3IP-213ENST00000550647 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
RAB3IP-213ENST00000550647 CAPN15O75808 1086 aa12.49□□□□□ -0.41
RAB3IP-213ENST00000550647 PROM2Q8N271 834 aa12.46□□□□□ -0.41
RAB3IP-213ENST00000550647 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
RAB3IP-213ENST00000550647 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-213ENST00000550647 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
RAB3IP-213ENST00000550647 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-213ENST00000550647 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
RAB3IP-213ENST00000550647 FBLN2P98095 1184 aa12.32□□□□□ -0.44
RAB3IP-213ENST00000550647 DSG3P32926 999 aa12.3□□□□□ -0.44
RAB3IP-213ENST00000550647 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
RAB3IP-213ENST00000550647 POLA2Q14181 598 aa12.2□□□□□ -0.46
RAB3IP-213ENST00000550647 ABCB7O75027 752 aa12.17□□□□□ -0.46
RAB3IP-213ENST00000550647 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
RAB3IP-213ENST00000550647 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-213ENST00000550647 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
RAB3IP-213ENST00000550647 PKD2Q13563 968 aa12□□□□□ -0.49
RAB3IP-213ENST00000550647 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
RAB3IP-213ENST00000550647 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
RAB3IP-213ENST00000550647 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
RAB3IP-213ENST00000550647 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
RAB3IP-213ENST00000550647 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
RAB3IP-213ENST00000550647 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
RAB3IP-213ENST00000550647 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
RAB3IP-213ENST00000550647 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-213ENST00000550647 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
RAB3IP-213ENST00000550647 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
RAB3IP-213ENST00000550647 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
RAB3IP-213ENST00000550647 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
RAB3IP-213ENST00000550647 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
RAB3IP-213ENST00000550647 BBXQ8WY36 941 aaPredicted RBP11.76□□□□□ -0.53
RAB3IP-213ENST00000550647 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
RAB3IP-213ENST00000550647 PABPN1Q86U42 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAB3IP-213ENST00000550647 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
RAB3IP-213ENST00000550647 BCANQ96GW7 911 aa11.7□□□□□ -0.54
RAB3IP-213ENST00000550647 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
RAB3IP-213ENST00000550647 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB3IP-213ENST00000550647 MIER1Q8N108 512 aa11.64□□□□□ -0.55
RAB3IP-213ENST00000550647 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
RAB3IP-213ENST00000550647 RGL2O15211 777 aa11.62□□□□□ -0.55
RAB3IP-213ENST00000550647 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
RAB3IP-213ENST00000550647 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
RAB3IP-213ENST00000550647 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
RAB3IP-213ENST00000550647 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
RAB3IP-213ENST00000550647 KDM2AQ9Y2K7 1162 aa11.55□□□□□ -0.56
RAB3IP-213ENST00000550647 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
RAB3IP-213ENST00000550647 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
RAB3IP-213ENST00000550647 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
RAB3IP-213ENST00000550647 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
RAB3IP-213ENST00000550647 CIZ1Q9ULV3 898 aaPredicted RBP11.47□□□□□ -0.57
RAB3IP-213ENST00000550647 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
RAB3IP-213ENST00000550647 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
RAB3IP-213ENST00000550647 GSE1Q14687 1217 aa11.43□□□□□ -0.58
RAB3IP-213ENST00000550647 REM2Q8IYK8 340 aaPredicted RBP11.43□□□□□ -0.58
RAB3IP-213ENST00000550647 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms