RNA–Protein interactions for RNA: ENST00000526994.6

RAB3IP-208, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-208ENST00000526994 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
RAB3IP-208ENST00000526994 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
RAB3IP-208ENST00000526994 PHF23Q9BUL5 403 aaPredicted RBP23.16■■□□□ 1.3
RAB3IP-208ENST00000526994 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
RAB3IP-208ENST00000526994 FOXD1Q16676 465 aa21.37■■□□□ 1.01
RAB3IP-208ENST00000526994 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
RAB3IP-208ENST00000526994 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
RAB3IP-208ENST00000526994 ADRA2BP18089 450 aa20.47■□□□□ 0.87
RAB3IP-208ENST00000526994 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
RAB3IP-208ENST00000526994 PIAS4Q8N2W9 510 aaPredicted RBP20.14■□□□□ 0.81
RAB3IP-208ENST00000526994 MSH5O43196 834 aa19.71■□□□□ 0.75
RAB3IP-208ENST00000526994 PPP4R3CPQ6ZMV5 832 aa18.79■□□□□ 0.6
RAB3IP-208ENST00000526994 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
RAB3IP-208ENST00000526994 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
RAB3IP-208ENST00000526994 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
RAB3IP-208ENST00000526994 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
RAB3IP-208ENST00000526994 KCNA4P22459 653 aa18.25■□□□□ 0.51
RAB3IP-208ENST00000526994 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
RAB3IP-208ENST00000526994 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
RAB3IP-208ENST00000526994 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
RAB3IP-208ENST00000526994 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
RAB3IP-208ENST00000526994 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
RAB3IP-208ENST00000526994 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
RAB3IP-208ENST00000526994 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
RAB3IP-208ENST00000526994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.335e-6■■■■□ 19.5
RAB3IP-208ENST00000526994 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
RAB3IP-208ENST00000526994 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
RAB3IP-208ENST00000526994 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
RAB3IP-208ENST00000526994 ZBTB22O15209 634 aa16.8■□□□□ 0.28
RAB3IP-208ENST00000526994 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
RAB3IP-208ENST00000526994 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
RAB3IP-208ENST00000526994 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-208ENST00000526994 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
RAB3IP-208ENST00000526994 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
RAB3IP-208ENST00000526994 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
RAB3IP-208ENST00000526994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
RAB3IP-208ENST00000526994 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
RAB3IP-208ENST00000526994 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-208ENST00000526994 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
RAB3IP-208ENST00000526994 APLP2Q06481 763 aa16.34■□□□□ 0.21
RAB3IP-208ENST00000526994 CAPN15O75808 1086 aa16.33■□□□□ 0.2
RAB3IP-208ENST00000526994 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
RAB3IP-208ENST00000526994 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
RAB3IP-208ENST00000526994 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
RAB3IP-208ENST00000526994 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
RAB3IP-208ENST00000526994 ABCB7O75027 752 aa16.04■□□□□ 0.16
RAB3IP-208ENST00000526994 DSG3P32926 999 aa16.04■□□□□ 0.16
RAB3IP-208ENST00000526994 POLA2Q14181 598 aa15.91■□□□□ 0.14
RAB3IP-208ENST00000526994 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
RAB3IP-208ENST00000526994 FBLN2P98095 1184 aa15.51■□□□□ 0.07
RAB3IP-208ENST00000526994 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
RAB3IP-208ENST00000526994 POTEHQ6S545 545 aa15.49■□□□□ 0.07
RAB3IP-208ENST00000526994 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
RAB3IP-208ENST00000526994 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
RAB3IP-208ENST00000526994 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
RAB3IP-208ENST00000526994 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
RAB3IP-208ENST00000526994 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
RAB3IP-208ENST00000526994 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
RAB3IP-208ENST00000526994 SPDYE4A6NLX3 237 aa15.09■□□□□ 0.01
RAB3IP-208ENST00000526994 AKT1S1Q96B36 256 aa15.05■□□□□ -0
RAB3IP-208ENST00000526994 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
RAB3IP-208ENST00000526994 FKBP8Q14318 412 aa15.03■□□□□ -0
RAB3IP-208ENST00000526994 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAB3IP-208ENST00000526994 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
RAB3IP-208ENST00000526994 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
RAB3IP-208ENST00000526994 PROM2Q8N271 834 aa14.77□□□□□ -0.05
RAB3IP-208ENST00000526994 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-208ENST00000526994 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
RAB3IP-208ENST00000526994 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
RAB3IP-208ENST00000526994 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
RAB3IP-208ENST00000526994 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
RAB3IP-208ENST00000526994 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
RAB3IP-208ENST00000526994 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
RAB3IP-208ENST00000526994 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
RAB3IP-208ENST00000526994 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
RAB3IP-208ENST00000526994 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
RAB3IP-208ENST00000526994 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
RAB3IP-208ENST00000526994 MIER1Q8N108 512 aa14.32□□□□□ -0.12
RAB3IP-208ENST00000526994 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
RAB3IP-208ENST00000526994 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
RAB3IP-208ENST00000526994 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
RAB3IP-208ENST00000526994 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
RAB3IP-208ENST00000526994 MNX1P50219 401 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-208ENST00000526994 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
RAB3IP-208ENST00000526994 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-208ENST00000526994 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAB3IP-208ENST00000526994 ZBTB47Q9UFB7 747 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-208ENST00000526994 HAX1O00165 279 aa14.08□□□□□ -0.16
RAB3IP-208ENST00000526994 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
RAB3IP-208ENST00000526994 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-208ENST00000526994 EVX2Q03828 476 aa13.97□□□□□ -0.17
RAB3IP-208ENST00000526994 NUBP1P53384 320 aa13.96□□□□□ -0.17
RAB3IP-208ENST00000526994 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
RAB3IP-208ENST00000526994 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
RAB3IP-208ENST00000526994 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
RAB3IP-208ENST00000526994 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
RAB3IP-208ENST00000526994 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-208ENST00000526994 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
RAB3IP-208ENST00000526994 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
RAB3IP-208ENST00000526994 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms