Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C12orf4Q9NQ89 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 LETM1P2-201ENST00000597330 2178 ntBASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 CA15P2-201ENST00000611168 834 ntBASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C12orf4Q9NQ89 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
C12orf4Q9NQ89 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C12orf4Q9NQ89 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
C12orf4Q9NQ89 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C12orf4Q9NQ89 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C12orf4Q9NQ89 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.33■□□□□ 0.53
C12orf4Q9NQ89 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 Z92544.1-202ENST00000571933 1220 ntBASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 AC010542.4-201ENST00000563151 1910 ntBASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C12orf4Q9NQ89 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 C17orf82-201ENST00000623772 1530 ntBASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C12orf4Q9NQ89 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 FAM99A-202ENST00000538190 1989 ntBASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C12orf4Q9NQ89 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms