Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP25Q9NPA2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MMP25Q9NPA2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 AC080038.1-201ENST00000611274 1154 ntBASIC19.8■□□□□ 0.76
MMP25Q9NPA2 BID-214ENST00000617586 542 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP25Q9NPA2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 AC092053.2-201ENST00000640557 1818 ntBASIC19.79■□□□□ 0.76
MMP25Q9NPA2 LINC00565-201ENST00000562710 2331 ntBASIC19.79■□□□□ 0.76
MMP25Q9NPA2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 AP001160.3-201ENST00000601484 763 ntBASIC19.79■□□□□ 0.76
MMP25Q9NPA2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP25Q9NPA2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 AC138907.5-202ENST00000569484 235 ntBASIC19.78■□□□□ 0.76
MMP25Q9NPA2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MMP25Q9NPA2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP25Q9NPA2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms